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Hello, everyone I'm trying to compile and install OASIS-MCT, but I'm having some problems. I'm in the make. My MPI and netCDF paths were specified in MyMachine, but an error occurred. Build output to /public/home/sunjiacheng/oasis3-mct/util/make_dir/COMP.log Build errors to /public/home/sunjiacheng/oasis3-mct/util/make_dir/COMP.err => Creating directories for compiling the static libraries in /public/home/sunjiacheng/oasis3-mct/INSTALL_OASIS/build-static/lib => Configuring libraries mpeu and mct gmake[1]: *** [makemct-static] Error 77 make: *** [static-libs-fortran] Error 2 comp.err configure: error: in `/public/home/sunjiacheng/oasis3-mct/INSTALL_OASIS/build-static/lib/mctdir': configure: error: C compiler cannot create executables See `config.log' for more details
Can you share the make.intel@example file with me. then I can troubleshoot your problem. Thank you. Subhadeep Maishal Email: subhadeepmaishal@kgpian.iitkgp.ac.in Indian Institute of Technology Kharagpur
#
# Include file for OASIS3 Makefile for Intel 21 on
# Linux computer with OpenMP
# module load intel/21.1.1
# module load intelmpi/2021.1.1
# module load lib/netcdf-fortran/4.4.4_phdf5_1.10.4
# module load python/3.7.7
#
###############################################################################
#
# CHAN : communication technique used in OASIS3 (MPI1/MPI2)
CHAN = MPI1
#
# Paths for libraries, object files and binaries
#
# COUPLE : path for oasis3-mct main directory
COUPLE = $(HOME)/oasis3-mct
#
# ARCHDIR : directory created when compiling
ARCHDIR := $(COUPLE)/INSTALL_OASIS
#
# MPI library
MPIDIR = /public/software/mpi/openmpi/intel2017/1.8.4
MPIBIN = $(MPIDIR)/bin
MPIBIN = $(MPIDIR)/bin
MPI_INCLUDE = $(MPIDIR)/include
MPILIB = -L$(MPIDIR)/lib
MPIRUN = $(MPIBIN)/mpirun
#
# NETCDF library
NETCDF_INCLUDE=/public/software/mathlib/netcdf/intel2017/4.6.2/include
NETCDF_LIBRARY = -Wl,-rpath,/public/software/mathlib/netcdf/intel2017/4.6.2/lib -L/public/software/mathlib/netcdf/intel2017/4.6.2/lib -lnetcdff -lnetcdf
#
# Compiling and other commands
MAKE = gmake
F90 = $(MPIBIN)/mpiifort -I$(MPI_INCLUDE)
F = $(F90)
f90 = $(F90)
f = $(F90)
CC = $(MPIBIN)/mpiicc -I$(MPI_INCLUDE)
LD = $(MPIBIN)/mpiifort $(MPILIB)
# Static libraries compilation options
STATOPT =
# Shared libraries options
DYNOPT = -fPIC
LDDYNOPT = -shared
AR = ar
ARFLAGS = -ruv
# Fortran libraries for C linking
F2C_LIBS = -lifcore -lifcoremt -lifport -limf
#
# CPP keys and compiler options
#
CPPDEF = -Duse_netCDF -Duse_comm_$(CHAN) -D__VERBOSE -DTREAT_OVERLAY
#
# -g is necessary in F90FLAGS and LDFLAGS for pgf90 versions lower than 6.1
#
FCBASEFLAGS = -O2 -xCORE-AVX2 -I. -assume byterecl -mt_mpi -qopenmp
#FCBASEFLAGS = -g -traceback -fpe0 -O0 -check all -check noarg_temp_created -I. -assume byterecl -mt_mpi -qopenmp
CCBASEFLAGS = -O2 -qopenmp
#
# INC_DIR : includes all *mod for each library
INC_DIR = -I$(ARCHDIR)/include
# FLIBS : for toys when linking in local Makefile
FLIBS=${NETCDF_LIBRARY}
###################
#
F90FLAGS = $(FCBASEFLAGS) $(INC_DIR) $(CPPDEF) -I$(NETCDF_INCLUDE)
f90FLAGS = $(FCBASEFLAGS) $(INC_DIR) $(CPPDEF) -I$(NETCDF_INCLUDE)
FFLAGS = $(FCBASEFLAGS) $(INC_DIR) $(CPPDEF) -I$(NETCDF_INCLUDE)
fFLAGS = $(FCBASEFLAGS) $(INC_DIR) $(CPPDEF) -I$(NETCDF_INCLUDE)
CCFLAGS = $(CCBASEFLAGS) $(INC_DIR) $(CPPDEF) -I$(NETCDF_INCLUDE)
LDFLAGS = $(FCBASEFLAGS)
F2C_LDFLAGS = $(F2C_LIBS)
#
#############################################################################
Hello, I re-edited my makeIntel file, but I made a mistake in the scrip part. How can I fix this? => Creating directories for compiling the static libraries in /public/home/sunjiacheng/oasis3-mct/INSTALL_OASIS/build/lib => Configuring libraries mpeu and mct => Compiling libraries mpeu and mct => Installing libraries mpeu and mct => Compiling library scrip gmake[1]: *** [makescrip-static] Error 2 make: *** [static-libs-fortran] Error 2
# # Can you try it # Include file for OASIS3 Makefile for a Linux system using # Portland Group Fortran Compiler and MPICH # Subhadeep Maishal (subhadeepmaishal@kgpian.iitkgp.ac.in) #Indian Institute of Technology Kharagpur ############################################################################### # # CHAN : communication technique used in OASIS3 (MPI1/MPI2/NONE) CHAN = MPI1 # # Paths for libraries, object files and binaries # # COUPLE : path for oasis3-mct main directory #Change the line below COUPLE = /home/20cl91p02/NEXTGEN/OA/oasis3-mct # # ARCHDIR : directory created when compiling #Change the line below ARCHDIR = /home/20cl91p02/NEXTGEN/OA/oasis3_mct_install # # NETCDF library NETCDF_INCLUDE = $(shell $(NETCDF_CONFIG) --fflags) NETCDF_LIBRARY = $(shell $(NETCDF_CONFIG) --flibs) # # MPI library MPIDIR = MPIBIN = MPI_INCLUDE = MPILIB = # Compiling and other commands MAKE = gmake F90 = mpiifort F = $(F90) f90 = $(F90) f = $(F90) CC = mpiicc -mt_mpi LD = mpiifort AR = ar ARFLAGS = r # # CPP keys and compiler options # CPPDEF = -Duse_libMPI -Duse_comm_$(CHAN) # # F90FLAGS_1 = -O2 -I. -mt_mpi f90FLAGS_1 = $(F90FLAGS_1) FFLAGS_1 = $(F90FLAGS_1) fFLAGS_1 = $(F90FLAGS_1) CCFLAGS_1 = -O2 -xAVX -mt_mpi LDFLAGS = -mt_mpi # ################### # # Additional definitions that should not be changed # FLIBS = $(NETCDF_LIBRARY) # BINDIR : directory for executables BINDIR = $(ARCHDIR)/bin # LIBBUILD : contains a directory for each library LIBBUILD = $(ARCHDIR)/build/lib # INCPSMILE : includes all *o and *mod for each library INCPSMILE = -I$(LIBBUILD)/psmile.$(CHAN) -I$(LIBBUILD)/mct -I$(LIBBUILD)/scrip F90FLAGS = $(F90FLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) f90FLAGS = $(f90FLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) FFLAGS = $(FFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) fFLAGS = $(fFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) CCFLAGS = $(CCFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) # #############################################################################
# #Can You try this ... #Subhadeep Maishal #Email: subhadeepmaishal@kgpian.iitkgp.ac.in #Indian Institute of Technology Kharagpur # Include file for OASIS3 Makefile for a Linux system using # Portland Group Fortran Compiler and MPICH # ############################################################################### # # CHAN : communication technique used in OASIS3 (MPI1/MPI2/NONE) CHAN = MPI1 # # Paths for libraries, object files and binaries # # COUPLE : path for oasis3-mct main directory COUPLE = /home/20cl91p02/NEXTGEN/OA/oasis3-mct # # ARCHDIR : directory created when compiling ARCHDIR = /home/20cl91p02/NEXTGEN/OA/oasis3_mct_install # # NETCDF library NETCDF_INCLUDE = $(shell $(NETCDF_CONFIG) --fflags) NETCDF_LIBRARY = $(shell $(NETCDF_CONFIG) --flibs) # # MPI library MPIDIR = MPIBIN = MPI_INCLUDE = MPILIB = # Compiling and other commands MAKE = gmake F90 = mpiifort F = $(F90) f90 = $(F90) f = $(F90) CC = mpiicc -mt_mpi LD = mpiifort AR = ar ARFLAGS = r # # CPP keys and compiler options # CPPDEF = -Duse_libMPI -Duse_comm_$(CHAN) # # F90FLAGS_1 = -O2 -I. -mt_mpi f90FLAGS_1 = $(F90FLAGS_1) FFLAGS_1 = $(F90FLAGS_1) fFLAGS_1 = $(F90FLAGS_1) CCFLAGS_1 = -O2 -xAVX -mt_mpi LDFLAGS = -mt_mpi # ################### # # Additional definitions that should not be changed # FLIBS = $(NETCDF_LIBRARY) # BINDIR : directory for executables BINDIR = $(ARCHDIR)/bin # LIBBUILD : contains a directory for each library LIBBUILD = $(ARCHDIR)/build/lib # INCPSMILE : includes all *o and *mod for each library INCPSMILE = -I$(LIBBUILD)/psmile.$(CHAN) -I$(LIBBUILD)/mct -I$(LIBBUILD)/scrip F90FLAGS = $(F90FLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) f90FLAGS = $(f90FLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) FFLAGS = $(FFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) fFLAGS = $(fFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) CCFLAGS = $(CCFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) # #############################################################################
Thanks for your advice, I have been able to solve the problem.
I tried a lot, but still have problems and report the following error: make -f TopMakefileOasis3 Compilation of the OASIS3-MCT static libraries Build output to /home/fvcom/oasis3-mct/util/make_dir/COMP.log Build errors to /home/fvcom/oasis3-mct/util/make_dir/COMP.err gmake[1]: Entering directory '/home/fvcom/oasis3-mct/util/make_dir' => Creating directories for compiling the static libraries in /home/fvcom/oasis3_mct_install/build/lib gmake[1]: Leaving directory '/home/fvcom/oasis3-mct/util/make_dir' gmake[1]: Entering directory '/home/fvcom/oasis3-mct/util/make_dir' => Configuring libraries mpeu and mct => Compiling libraries mpeu and mct => Installing libraries mpeu and mct gmake[1]: Leaving directory '/home/fvcom/oasis3-mct/util/make_dir' gmake[1]: Entering directory '/home/fvcom/oasis3-mct/util/make_dir' => Compiling library scrip gmake[1]: *** [TopMakefileOasis3:246: makescrip-static] Error 2 gmake[1]: Leaving directory '/home/fvcom/oasis3-mct/util/make_dir' make: *** [TopMakefileOasis3:93: static-libs-fortran] Error 2 Here are the contents of my make.inc: ############################################################################### # # CHAN : communication technique used in OASIS3 (MPI1/MPI2/NONE) CHAN = MPI1 #CHAN = MPI1 # Paths for libraries, object files and binaries CHAN = MPI1 # # Paths for libraries, object files and binaries # COUPLE : path for oasis3-mct main directory COUPLE = /home/fvcom/oasis3-mct # # ARCHDIR : directory for oasis3-mct main directory # ARCHDIR : directory created when compiling ARCHDIR = /home/fvcom/oasis3_mct_install # # ARCHDIR : directory created when compiling # NETCDF library NETCDF_INCLUDE = $(shell $(NETCDF_CONFIG) --fflags) NETCDF_LIBRARY = $(shell $(NETCDF_CONFIG) --flibs) # MPI library # MPI library MPIDIR = MPIBIN = MPI_INCLUDE = MPILIB = # Compiling and other commands MAKE = gmake F90 = mpiifort F = $(F90) f90 = $(F90) f = $(F90) CC = mpiicc -mt_mpi LD = mpiifort AR = ar ARFLAGS = r #ARFLAGS = r # CPP keys and compiler options #CPPDEF = -Duse_libMPI -Duse_comm_$(CHAN) CPPDEF = -Duse_libMPI -Duse_comm_$(CHAN) # # # CPPDEF = -Duse_libMPI F90FLAGS_1 = -O2 -I. -mt_mpi f90FLAGS_1 = $(F90FLAGS_1) fflags_1 = $(F90FLAGS_1) fFLAGS_1 = $(F90FLAGS_1) CCFLAGS_1 = -O2 -xAVX -mt_mpi LDFLAGS = -mt_mpi #LDFLAGS = -mt_mpi ################### # # Additional definitions that should not be changed # # Additional definitions that should not be changed FLIBS = $(NETCDF_LIBRARY) # BINDIR : directory for executables BINDIR = $(ARCHDIR)/bin # LIBBUILD : contains a directory for each library LIBBUILD = $(ARCHDIR)/build/lib # INCPSMILE : includes all *o and *mod for each library INCPSMILE = -I$(LIBBUILD)/psmile.$(CHAN) -I$(LIBBUILD)/mct -I$(LIBBUILD)/scrip F90FLAGS = $(F90FLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) f90FLAGS = $(f90FLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) fflags = $(fflags_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) fFLAGS = $(fFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) CCFLAGS = $(CCFLAGS_1) $(INCPSMILE) $(CPPDEF) -I$(NETCDF_INCLUDE) # #############################################################################
I replied incorrectly. Sorry.